cuda-meme-3.0.12

cuda-meme-3.0.12
................\cuda-meme-3.0.12
................\................\esp2png.sh,606,2010-10-26
................\................\etc
................\................\...\beadstring.xsl,32589,2010-10-26

................\................\...\block-diagram.xsl,14274,2010-10-26
................\................\...\cisml-to-gff.xsl,1788,2010-10-26
................\................\...\cisml-to-html.xsl,1762,2010-10-26
................\................\...\cisml-to-text.xsl,1520,2010-10-26
................\................\...\cisml.css,265,2010-10-26
................\................\...\fasta_db.csv,0,2010-10-26
................\................\...\fimo-to-gff.xsl,1788,2010-10-26
................\................\...\fimo-to-html.xsl,2711,2010-10-26
................\................\...\fimo-to-text.xsl,1520,2010-10-26
................\................\...\fimo.sh,3010,2010-10-26
................\................\...\fimo.xsl,29937,2010-10-26
................\................\...\fimo_config.xml,871,2010-10-26
................\................\...\glam2.sh,2768,2010-10-26
................\................\...\glam2scan.sh,2506,2010-10-26
................\................\...\glam2scan_config.xml,884,2010-10-26
................\................\...\glam2_config.xml,916,2010-10-26
................\................\...\gomo.sh,5307,2010-10-26
................\................\...\gomo.xsl,20300,2010-12-17
................\................\...\gomo_config.xml,923,2010-10-26
................\................\...\gomo_db.csv,0,2010-10-26
................\................\...\help.gif
................\................\...\hmm-text.xsl,5338,2010-10-26
................\................\...\logo.js.xsl,24682,2010-10-26
................\................\...\mast-to-html.xsl,93786,2010-10-26
................\................\...\mast.sh,2846,2010-10-26
................\................\...\mast_config.xml,3006,2010-10-26
................\................\...\mcast.sh,2279,2010-10-26
................\................\...\mcast_config.xml,1525,2010-10-26
................\................\...\meme-mast.sh,3458,2010-10-26
................\................\...\meme.css.xsl,5292,2010-10-26
................\................\...\meme.doc,34198,2010-10-26
................\................\...\meme.xsl,79474,2010-12-17
................\................\...\meme_config.xml,3461,2010-10-26
................\................\...\motif_db.csv,0,2010-10-26
................\................\...\prior1.plib,314,2010-10-26
................\................\...\prior30.plib,9706,2010-10-26
................\................\...\template.eps,11810,2010-10-26
................\................\...\template.svg,1243,2010-10-26
................\................\...\timer.sh,406,2010-10-26
................\................\hostfile,56,2010-10-29
................\................\LICENSE,1968,2010-10-26
................\................\Makefile.gpu,171,2010-10-26
................\................\Makefile.mgpu,175,2010-10-26
................\................\README,7543,2011-07-20
................\................\src
................\................\...\aa.h,2484,2010-10-26
................\................\...\align.h,866,2010-10-26
................\................\...\alignment.c,36117,2010-10-26
................\................\...\alignment.h,9149,2010-10-26
................\................\...\alphabet.c,13637,2010-10-26
................\................\...\alphabet.h,5105,2010-10-26
................\................\...\alphtype.c,1160,2010-10-26
................\................\...\ama.c,19707,2010-10-26
................\................\...\ama_scan.c,6097,2010-10-26
................\................\...\ama_scan.h,1538,2010-10-26
................\................\...\array-list.c,10362,2010-10-26
................\................\...\array-list.h,4377,2010-10-26
................\................\...\array.c,31002,2010-10-26
................\................\...\array.h,14785,2010-10-26
................\................\...\background.c,17732,2010-10-26
................\................\...\background.h,1271,2010-10-26
................\................\...\banner.c,2559,2010-10-26
................\................\...\banner.h,219,2010-10-26
................\................\...\beadstring-xml.h,445,2010-10-26
................\................\...\beadstring.c,39929,2010-10-26
................\................\...\beadstring.h,1899,2010-10-26
................\................\...\binary-search.c,953,2010-10-26
................\................\...\binary-search.h,1093,2010-10-26
................\................\...\branching_search.c,23933,2010-10-26
................\................\...\buffer.c,23899,2010-10-26
................\................\...\buffer.h,10101,2010-10-26
................\................\...\build-hmm.c,46781,2010-10-26
................\................\...\build-hmm.h,1992,2010-10-26
................\................\...\calculate_p_y.c,21484,2010-10-26
................\................\...\calculate_p_y.h,3106,2010-10-26
................\................\...\ceqlogo.c,75112,2010-12-18
................\................\...\ceqlogo.h,44664,2010-10-26
................\................\...\cisml-dtd.h,2200,2010-10-26
................\................\...\cisml.c,116950,2010-10-26
................\................\...\cisml.h,50106,2010-10-26
................\................\...\clustalw-io.c,15817,2010-10-26
................\................\...\clustalw-io.h,1654,2010-10-26
................\................\...\clustalw2fasta.c,4163,2010-10-26
................\................\...\clustalw2phylip.c,1321,2010-10-26
................\................\...\config.h,131,2011-07-20
................\................\...\CudaAlign.cu,7031,2010-10-26
................\................\...\CudaAlign.h,1222,2010-10-26
................\................\...\CudaGenericFunction.cu,6968,2011-03-07
................\................\...\CudaGenericFunction.h,2820,2011-03-07
................\................\...\CudaGenericFunction.linkinfo,135,2011-03-07
................\................\...\CudaMemeAssignGPUs.cu,4422,2010-10-26
................\................\...\CudaMemeAssignGPUs.h,100,2010-10-26
................\................\...\CudaMemeAssignGPUs.linkinfo,135,2011-03-07
................\................\...\CudaMemeDefs.h,1518,2010-10-28